Integration with chewBBACA
==========================

`chewBBACA <https://github.com/B-UMMI/chewBBACA>`_ contains scripts that enable the 
user to interact with Chewie-NS. Please visit `Installation <https://chewbbaca.readthedocs.io/en/latest/user/getting_started/installation.html>`_
for detailed instructions on how to install chewBBACA.

These scripts allow users to:

- `Upload a schema to Chewie-NS <https://chewbbaca.readthedocs.io/en/latest/user/modules/LoadSchema.html>`_.
- `Download a schema from Chewie-NS <https://chewbbaca.readthedocs.io/en/latest/user/modules/DownloadSchema.html>`_.
- `Synchronize a schema with its remote version in Chewie-NS <https://chewbbaca.readthedocs.io/en/latest/user/modules/SyncSchema.html>`_.
- `Retrieve basic information about the species and schemas in Chewie-NS <https://chewbbaca.readthedocs.io/en/latest/user/modules/NSStats.html>`_.

A tutorial with detailed instructions about the integration with chewBBACA is available at
`Integration with Chewie-NS <https://chewbbaca.readthedocs.io/en/latest/user/tutorials/chewieNS_step_by_step.html>`_.